apollo.gui.detailviewers.sequencealigner.actions
Class CreateIntronAction

java.lang.Object
  javax.swing.AbstractAction
      apollo.gui.detailviewers.sequencealigner.actions.CreateIntronAction

All Implemented Interfaces:

java.awt.event.ActionListener, java.io.Serializable, java.lang.Cloneable, java.util.EventListener, javax.swing.Action

public class CreateIntronAction
extends javax.swing.AbstractAction

An Action class for creating a single base intron within an exon region.

See Also:

Serialized Form

Field Summary

Fields inherited from class javax.swing.AbstractAction

changeSupport, enabled

Fields inherited from interface javax.swing.Action

ACCELERATOR_KEY, ACTION_COMMAND_KEY, DEFAULT, LONG_DESCRIPTION, MNEMONIC_KEY, NAME, SHORT_DESCRIPTION, SMALL_ICON

Constructor Summary

CreateIntronAction(java.lang.String name, GuiCurationState curationState, AnnotationEditor annotationEditor)
Constructor

Method Summary

void	actionPerformed(java.awt.event.ActionEvent e) Performs the insertion
void	setFeature(SeqFeatureI feature) Sets what feature the exon will be added to
void	setSelectedBasePair(int basepair) Sets the location of the one base intron

Methods inherited from class javax.swing.AbstractAction

addPropertyChangeListener, clone, firePropertyChange, getKeys, getPropertyChangeListeners, getValue, isEnabled, putValue, removePropertyChangeListener, setEnabled

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

CreateIntronAction

public CreateIntronAction(java.lang.String name,
                          GuiCurationState curationState,
                          AnnotationEditor annotationEditor)

Constructor

Parameters:

name - the name of this action

curationState - the curation state

annotationEditor - the annotation editor

Method Detail

actionPerformed

public void actionPerformed(java.awt.event.ActionEvent e)

Performs the insertion

setFeature

public void setFeature(SeqFeatureI feature)

Sets what feature the exon will be added to

Parameters:

feature -

setSelectedBasePair

public void setSelectedBasePair(int basepair)

Sets the location of the one base intron

Parameters:

basepair - genomic coordinates The base pair should be within an exon region for the feature