apollo.editor
Class AnnotationChangeEvent

java.lang.Object
  java.util.EventObject
      apollo.editor.FeatureChangeEvent
          apollo.editor.AnnotationChangeEvent

All Implemented Interfaces:

java.io.Serializable

Direct Known Subclasses:

AnnotationAddEvent, AnnotationCompoundEvent, AnnotationDeleteEvent, AnnotationReplaceEvent, AnnotationUpdateEvent, AnnotSessionDoneEvent

public class AnnotationChangeEvent
extends FeatureChangeEvent

A controller managed event class which signals when a change is made to a set of annotations and what type of change occurred. Objects interested in listening for these event should implement the FeatureChangeListener interface and register with the controller. Eventually I would like this to just be a carrier/wrapper for a transaction, so it could/should just query transaction for everything. All of its fields are really redundant of transactions.

See Also:

Serialized Form

Field Summary

Fields inherited from class apollo.editor.FeatureChangeEvent

ADD, DELETE, logger, MERGE, parentFeature, REDRAW, REPLACE, SPLIT, SYNC

Fields inherited from class java.util.EventObject

source

Constructor Summary

protected	AnnotationChangeEvent(java.lang.Object source) Solely for edit session done event
protected	AnnotationChangeEvent(java.lang.Object source, AnnotatedFeatureI feature) No subpart
protected	AnnotationChangeEvent(java.lang.Object source, AnnotatedFeatureI changedFeat, TransactionSubpart subpart) With subpart

Method Summary

void	addTransaction(Transaction trans) If compound change event, add trans to compound transaction AnnotationCompoundEvent overrides no-op
AnnotatedFeatureI	getAnnotTop() rename get change top? annot top? should this return an AnnotatedFeatureI? rename getAnnotRoot?
AnnotatedFeatureI	getChangedAnnot()
SeqFeatureI	getChangeTop()
AnnotationChangeEvent	getChildChangeEvent(int i) Default is null.
AnnotatedFeatureI	getDeletedFeature()
int	getNumberOfChildren() If compound event return # of child events, default 0
Comment	getOldComment()
java.lang.String	getOldId() A parent update for transcripts will change the transcript id and make it impossible to update the db.
java.lang.String	getOldString()
SeqFeatureI	getParentFeature()
int	getSubpartRank()
boolean	isCommentChange()
boolean	isStringChange()
boolean	isUndo()
void	setDeletedFeature(AnnotatedFeatureI delFeat)
void	setOldComment(Comment comment) For comment deletes
void	setOldId(java.lang.String oldId) Set original id before update of parent changed it.
void	setOldString(java.lang.String oldString) for updates(name...) and deletes(syn) to strings
void	setSubpartRank(int rank) For subparts that are lists, like comments and synoyms we need to know which item in the list is being operated on
java.lang.String	toString()

Methods inherited from class apollo.editor.FeatureChangeEvent

getAddedFeature, getChangedFeature, getOperation, getOperationAsString, getReplacedFeature, getSource, getSubpart, getUpdateDetails, hasSubpart, isAdd, isCompound, isDelete, isEndOfEditSession, isExonChange, isMerge, isMove, isRootAnnotChange, isSplit, isSync, isTranscriptChange, isUpdate, setChangeTop, setParentFeature, setReplacedFeature

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

AnnotationChangeEvent

protected AnnotationChangeEvent(java.lang.Object source)

Solely for edit session done event

AnnotationChangeEvent

protected AnnotationChangeEvent(java.lang.Object source,
                                AnnotatedFeatureI feature)

No subpart

AnnotationChangeEvent

protected AnnotationChangeEvent(java.lang.Object source,
                                AnnotatedFeatureI changedFeat,
                                TransactionSubpart subpart)

With subpart

Method Detail

isUndo

public boolean isUndo()

getParentFeature

public SeqFeatureI getParentFeature()

Overrides:

getParentFeature in class FeatureChangeEvent

getNumberOfChildren

public int getNumberOfChildren()

If compound event return # of child events, default 0

getChildChangeEvent

public AnnotationChangeEvent getChildChangeEvent(int i)

Default is null. If compound event return ith chil event

addTransaction

public void addTransaction(Transaction trans)

If compound change event, add trans to compound transaction AnnotationCompoundEvent overrides no-op

getChangedAnnot

public AnnotatedFeatureI getChangedAnnot()

getDeletedFeature

public AnnotatedFeatureI getDeletedFeature()

setDeletedFeature

public void setDeletedFeature(AnnotatedFeatureI delFeat)

getAnnotTop

public AnnotatedFeatureI getAnnotTop()

rename get change top? annot top? should this return an AnnotatedFeatureI? rename getAnnotRoot?

getChangeTop

public SeqFeatureI getChangeTop()

Overrides:

getChangeTop in class FeatureChangeEvent

setSubpartRank

public void setSubpartRank(int rank)

For subparts that are lists, like comments and synoyms we need to know which item in the list is being operated on

getSubpartRank

public int getSubpartRank()

setOldString

public void setOldString(java.lang.String oldString)

for updates(name...) and deletes(syn) to strings

isStringChange

public boolean isStringChange()

getOldString

public java.lang.String getOldString()

setOldComment

public void setOldComment(Comment comment)

For comment deletes

getOldComment

public Comment getOldComment()

isCommentChange

public boolean isCommentChange()

setOldId

public void setOldId(java.lang.String oldId)

Set original id before update of parent changed it.

getOldId

public java.lang.String getOldId()

A parent update for transcripts will change the transcript id and make it impossible to update the db. getOldId returns the original ID of the transcript before changes.

toString

public java.lang.String toString()

Overrides:

toString in class FeatureChangeEvent