apollo.dataadapter.ensj19
Class DataSourceConfigurationPanel

java.lang.Object
  java.awt.Component
      java.awt.Container
          javax.swing.JComponent
              javax.swing.JPanel
                  apollo.dataadapter.ensj19.DataSourceConfigurationPanel

All Implemented Interfaces:

java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable, javax.accessibility.Accessible

public class DataSourceConfigurationPanel
extends javax.swing.JPanel

This panel allows the user to configure the parameters necessary for the EnsJ-interface to an ensembl database.

See Also:

Serialized Form

Nested Class Summary

class	DataSourceConfigurationPanel.DataChangeListener Triggered when the user types into any data field
class	DataSourceConfigurationPanel.EnsemblDBSelectionListener Triggered when the user selects a particular database
class	DataSourceConfigurationPanel.HostListener Triggered when the user pushes the "find" button

Nested classes/interfaces inherited from class javax.swing.JPanel

javax.swing.JPanel.AccessibleJPanel

Nested classes/interfaces inherited from class javax.swing.JComponent

javax.swing.JComponent.AccessibleJComponent

Nested classes/interfaces inherited from class java.awt.Container

java.awt.Container.AccessibleAWTContainer

Nested classes/interfaces inherited from class java.awt.Component

java.awt.Component.AccessibleAWTComponent, java.awt.Component.BltBufferStrategy, java.awt.Component.FlipBufferStrategy

Field Summary

Fields inherited from class javax.swing.JComponent

accessibleContext, listenerList, TOOL_TIP_TEXT_KEY, ui, UNDEFINED_CONDITION, WHEN_ANCESTOR_OF_FOCUSED_COMPONENT, WHEN_FOCUSED, WHEN_IN_FOCUSED_WINDOW

Fields inherited from class java.awt.Component

BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Constructor Summary

DataSourceConfigurationPanel()

DataSourceConfigurationPanel(java.lang.String prefix)

Method Summary

void	addExternalDataChangeListener(java.awt.event.ActionListener listener) Sometimes we want to know when the user has started modifying the datasource, from _outside_ this panel.
void	attachEnsemblDatabaseDropdownListener()
void	detachEnsemblDatabaseDropdownListener()
javax.swing.JComboBox	getEnsemblDatabaseDropdown()
java.awt.event.ActionListener	getEnsemblDBDropdownSelectionListener()
javax.swing.JButton	getFindButton()
java.awt.event.ActionListener	getHostListener()
java.awt.event.ActionListener	getInteractionListener()
java.lang.String	getPrefix() Prefix is used to 'namespace' a group of settings.
java.util.Properties	getProperties() Returns the properties described in setProperties().
java.lang.String	getSelectedEnsemblDatabase()
static void	main(java.lang.String[] args)
void	setHostListener(java.awt.event.ActionListener newValue)
void	setInteractionListener(java.awt.event.ActionListener listener)
void	setProperties(java.util.Properties properties) This should be used to initialize the panel from historical etc values.
void	setSelectedEnsemblDatabase(java.lang.String database)

Methods inherited from class javax.swing.JPanel

getAccessibleContext, getUI, getUIClassID, paramString, setUI, updateUI

Methods inherited from class javax.swing.JComponent

addAncestorListener, addNotify, addVetoableChangeListener, computeVisibleRect, contains, createToolTip, disable, enable, firePropertyChange, firePropertyChange, firePropertyChange, fireVetoableChange, getActionForKeyStroke, getActionMap, getAlignmentX, getAlignmentY, getAncestorListeners, getAutoscrolls, getBorder, getBounds, getClientProperty, getComponentGraphics, getComponentPopupMenu, getConditionForKeyStroke, getDebugGraphicsOptions, getDefaultLocale, getFontMetrics, getGraphics, getHeight, getInheritsPopupMenu, getInputMap, getInputMap, getInputVerifier, getInsets, getInsets, getListeners, getLocation, getMaximumSize, getMinimumSize, getNextFocusableComponent, getPopupLocation, getPreferredSize, getRegisteredKeyStrokes, getRootPane, getSize, getToolTipLocation, getToolTipText, getToolTipText, getTopLevelAncestor, getTransferHandler, getVerifyInputWhenFocusTarget, getVetoableChangeListeners, getVisibleRect, getWidth, getX, getY, grabFocus, isDoubleBuffered, isLightweightComponent, isManagingFocus, isOpaque, isOptimizedDrawingEnabled, isPaintingTile, isRequestFocusEnabled, isValidateRoot, paint, paintBorder, paintChildren, paintComponent, paintImmediately, paintImmediately, print, printAll, printBorder, printChildren, printComponent, processComponentKeyEvent, processKeyBinding, processKeyEvent, processMouseEvent, processMouseMotionEvent, putClientProperty, registerKeyboardAction, registerKeyboardAction, removeAncestorListener, removeNotify, removeVetoableChangeListener, repaint, repaint, requestDefaultFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, resetKeyboardActions, reshape, revalidate, scrollRectToVisible, setActionMap, setAlignmentX, setAlignmentY, setAutoscrolls, setBackground, setBorder, setComponentPopupMenu, setDebugGraphicsOptions, setDefaultLocale, setDoubleBuffered, setEnabled, setFocusTraversalKeys, setFont, setForeground, setInheritsPopupMenu, setInputMap, setInputVerifier, setMaximumSize, setMinimumSize, setNextFocusableComponent, setOpaque, setPreferredSize, setRequestFocusEnabled, setToolTipText, setTransferHandler, setUI, setVerifyInputWhenFocusTarget, setVisible, unregisterKeyboardAction, update

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, addImpl, addPropertyChangeListener, addPropertyChangeListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalKeys, getFocusTraversalPolicy, getLayout, getMousePosition, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, printComponents, processContainerEvent, processEvent, remove, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusCycleRoot, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setLayout, transferFocusBackward, transferFocusDownCycle, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, createImage, createImage, createVolatileImage, createVolatileImage, disableEvents, dispatchEvent, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBackground, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusCycleRootAncestor, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getForeground, getGraphicsConfiguration, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputContext, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocale, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPeer, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getToolkit, getTreeLock, gotFocus, handleEvent, hasFocus, hide, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, resize, resize, setBounds, setBounds, setComponentOrientation, setCursor, setDropTarget, setFocusable, setFocusTraversalKeysEnabled, setIgnoreRepaint, setLocale, setLocation, setLocation, setName, setSize, setSize, show, show, size, toString, transferFocus, transferFocusUpCycle

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

DataSourceConfigurationPanel

public DataSourceConfigurationPanel()

DataSourceConfigurationPanel

public DataSourceConfigurationPanel(java.lang.String prefix)

Method Detail

detachEnsemblDatabaseDropdownListener

public void detachEnsemblDatabaseDropdownListener()

attachEnsemblDatabaseDropdownListener

public void attachEnsemblDatabaseDropdownListener()

addExternalDataChangeListener

public void addExternalDataChangeListener(java.awt.event.ActionListener listener)

Sometimes we want to know when the user has started modifying the datasource, from _outside_ this panel. This notifies external people that "something happened" through an actionevent. The actionlistener added here is notified via the DataChangeListener inner class (which is itself triggered by a key press in a data-source field).

getPrefix

public java.lang.String getPrefix()

Prefix is used to 'namespace' a group of settings. It's presence allows for multiple DataSourceConfigurationPanel settings to be stored in the same properties object.

Returns:

prefix parameter key prefix.

setProperties

public void setProperties(java.util.Properties properties)

This should be used to initialize the panel from historical etc values. This sets the values for all the fields. Here are the keys which have to come in:

• jdbcDriver
• host
• port
• user
• password
• ensemblDriver
• ensemblDatabase

If prefix is set then the keys must begin with prefix. e.g if prefix="variation" then the input key corresponding to "host" above would be "variation.host".

I will first remove the actionlisteners, set the values for all input fields except the ensembl database drop-down, then load the dropdown (if I can), then set the selected value of the dropdown onto it (if it exists).

getProperties

public java.util.Properties getProperties()

Returns the properties described in setProperties(). If prefix is set then this is prepended to each key.

See Also:

setProperties()

main

public static void main(java.lang.String[] args)

getEnsemblDatabaseDropdown

public javax.swing.JComboBox getEnsemblDatabaseDropdown()

getSelectedEnsemblDatabase

public java.lang.String getSelectedEnsemblDatabase()

setSelectedEnsemblDatabase

public void setSelectedEnsemblDatabase(java.lang.String database)

getFindButton

public javax.swing.JButton getFindButton()

getHostListener

public java.awt.event.ActionListener getHostListener()

setInteractionListener

public void setInteractionListener(java.awt.event.ActionListener listener)

getInteractionListener

public java.awt.event.ActionListener getInteractionListener()

getEnsemblDBDropdownSelectionListener

public java.awt.event.ActionListener getEnsemblDBDropdownSelectionListener()

setHostListener

public void setHostListener(java.awt.event.ActionListener newValue)