apollo.dataadapter.debug
Class DisplayTool

java.lang.Object
  apollo.dataadapter.debug.DisplayTool

public class DisplayTool
extends java.lang.Object

Constructor Summary

DisplayTool()

Method Summary

static void	checkRefFeatures(FeatureSetI fs)
static java.lang.String	getScoresString(SeqFeatureI sf)
static java.lang.String	getStringForSeqFeature(SeqFeatureI sf)
static void	outputSpaces(int nSpace)
static void	showExon(ExonI e)
static void	showFeatureSet(FeatureSetI fs)
static void	showFeatureSet(FeatureSetI fs, int indent)
static void	showGene(AnnotatedFeatureI g)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

DisplayTool

public DisplayTool()

Method Detail

showGene

public static void showGene(AnnotatedFeatureI g)

showExon

public static void showExon(ExonI e)

showFeatureSet

public static void showFeatureSet(FeatureSetI fs)

showFeatureSet

public static void showFeatureSet(FeatureSetI fs,
                                  int indent)

outputSpaces

public static void outputSpaces(int nSpace)

getStringForSeqFeature

public static java.lang.String getStringForSeqFeature(SeqFeatureI sf)

getScoresString

public static java.lang.String getScoresString(SeqFeatureI sf)

checkRefFeatures

public static void checkRefFeatures(FeatureSetI fs)